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Skvortsov AT, Dagdug L, Berezhkovskii AM, MacGillivray IR, and Bezrukov SM (2021) Evaluating diffusion resistance of a constriction in a membrane channel by the method of boundary homogenization . Phys Rev E. 1031-1:012408. https://doi.org/10.1103/PhysRevE.103.012408
Rostovtseva TK, Bezrukov SM, and Hoogerheide DP (2021) Regulation of Mitochondrial Respiration by VDAC Is Enhanced by Membrane-Bound Inhibitors with Disordered Polyanionic C-Terminal Domains. International Journal of Molecular Sciences. 2214. https://doi.org/10.3390/ijms22147358
Rosencrans WM, Rajendran M, Bezrukov SM, and Rostovtseva TK (2021) VDAC regulation of mitochondrial calcium flux: From channel biophysics to disease . Cell Calcium. 94:102356. https://doi.org/10.1016/j.ceca.2021.102356
Rosencrans WM, Aguilella VM, Rostovtseva TK, and Bezrukov SM (2021) alpha-Synuclein emerges as a potent regulator of VDAC-facilitated calcium transport . Cell Calcium. 95:102355. https://doi.org/10.1016/j.ceca.2021.102355
Misiura MM, Berezhkovskii AM, Bezrukov SM, and Kolomeisky AB (2021) Surface-facilitated trapping by active sites: From catalysts to viruses . J Chem Phys. 15518:184106. https://doi.org/10.1063/5.0069917
Hoogerheide DP, Rostovtseva TK, Jacobs D, Gurnev PA, and Bezrukov SM (2021 Tunable Electromechanical Nanopore Trap Reveals Populations of Peripheral Membrane Protein Binding Conformations . ACS Nano. 151:989-1001. https://doi.org/10.1021/acsnano.0c07672
Hoogerheide DP, Rostovtseva TK, and Bezrukov SM (2021) Exploring lipid-dependent conformations of membrane-bound alpha-synuclein with the VDAC nanopore . Biochim Biophys Acta Biomembr. 18639:183643. https://doi.org/10.1016/j.bbamem.2021.183643
Dagdug L, Berezhkovskii AM, Zitserman VY, and Bezrukov SM (2021) Effective diffusivity of a Brownian particle in a two-dimensional periodic channel of abruptly alternating width . Phys Rev E. 1036-1:062106. https://doi.org/10.1103/PhysRevE.103.062106
Dagdug L, Berezhkovskii AM, Zitserman VY, and Bezrukov SM (2021) Trapping of particles diffusing in two dimensions by a hidden binding site . Phys Rev E. 1031-1:012135. https://doi.org/10.1103/PhysRevE.103.012135
Berezhkovskii AM, Bezrukov SM, and Makarov DE (2021) Localized potential well vs binding site: Mapping solute dynamics in a membrane channel onto one-dimensional description . J Chem Phys. 15411:111101. https://doi.org/10.1063/5.0044044
Berezhkovskii AM and Bezrukov SM (2021) Capturing single molecules by nanopores: measured times and thermodynamics . Phys Chem Chem Phys. 232:1610-1615. https://doi.org/10.1039/d0cp04747c
Rovini A, Gurnev PA, Beilina A, Queralt-Martin M, Rosencrans W, Cookson MR, Bezrukov SM, and Rostovtseva TK (2020) Molecular mechanism of olesoxime-mediated neuroprotection through targeting alpha-synuclein interaction with mitochondrial VDAC . Cell Mol Life Sci. 7718:3611-3626. https://doi.org/10.1007/s00018-019-03386-w
Rostovtseva TK, Queralt-Martin M, Rosencrans WM, and Bezrukov SM (2020) Targeting the Multiple Physiologic Roles of VDAC With Steroids and Hydrophobic Drugs . Front Physiol. 11:446. https://doi.org/10.3389/fphys.2020.00446
Queralt-Martin M, Hoogerheide DP, Noskov SY, Berezhkovskii AM, Rostovtseva TK, and Bezrukov SM (2020) VDAC Gating Thermodynamics, but Not Gating Kinetics, Are Virtually Temperature Independent . Biophys J. 11912:2584-2592. https://doi.org/10.1016/j.bpj.2020.10.039
Queralt-Martin M, Bergdoll L, Teijido O, Munshi N, Jacobs D, Kuszak AJ, Protchenko O, Reina S, Magri A, De Pinto V, Bezrukov SM, Abramson J, and Rostovtseva TK (2020) A lower affinity to cytosolic proteins reveals VDAC3 isoform-specific role in mitochondrial biology . J Gen Physiol. 1522. https://doi.org/10.1085/jgp.201912501
Hoogerheide DP, Gurnev PA, Rostovtseva TK, and Bezrukov SM (2020) Effect of a post-translational modification mimic on protein translocation through a nanopore . Nanoscale. 1220:11070-11078. https://doi.org/10.1039/d0nr01577f
Berezhkovskii AM, Dagdug L, and Bezrukov SM (2020) Peculiarities of the Mean Transition Path Time Dependence on the Barrier Height in Entropy Potentials . J Phys Chem B. 12412:2305-2310. https://doi.org/10.1021/acs.jpcb.9b09595
Queralt-Martin M, Bergdoll L, Jacobs D, Bezrukov SM, Abramson J, and Rostovtseva TK (2019) Assessing the role of residue E73 and lipid headgroup charge in VDAC1 voltage gating . Biochim Biophys Acta Bioenerg. 18601:22-29. https://doi.org/10.1016/j.bbabio.2018.11.001
Jacobs D, Hoogerheide DP, Rovini A, Jiang Z, Lee JC, Rostovtseva TK, and Bezrukov SM (2019) Probing Membrane Association of alpha-Synuclein Domains with VDAC Nanopore Reveals Unexpected Binding Pattern . Sci Rep. 91:4580. https://doi.org/10.1038/s41598-019-40979-8
Berezhkovskii AM, Dagdug L, and Bezrukov SM (2019) Two-site versus continuum diffusion model of blocker dynamics in a membrane channel: Comparative analysis of escape kinetics . The Journal of Chemical Physics. 1515. https://doi.org/10.1063/1.5110489
Berezhkovskii AM, Dagdug L, and Bezrukov SM (2019) Exact Solutions for Distributions of First-Passage, Direct-Transit, and Looping Times in Symmetric Cusp Potential Barriers and Wells . J Phys Chem B. 12317:3786-3796. https://doi.org/10.1021/acs.jpcb.9b01616
Berezhkovskii AM, Dagdug L, and Bezrukov SM (2019) Trapping of diffusing particles by small absorbers localized in a spherical region . J Chem Phys. 1506:064107. https://doi.org/10.1063/1.5083808
Berezhkovskii AM and Bezrukov SM (2019) Blocker escape kinetics from a membrane channel analyzed by mapping blocker diffusive dynamics onto a two-site model . J Chem Phys. 15019:194103. https://doi.org/10.1063/1.5095594
M. Weinrich, D.L. Worcester, and S.M. Bezrukov. Lipid nanodomains change ion channel function. Nanoscale , 2017, 9(35):13291−13297. DOI: 10.1039/c7nr03926c
A.M. Berezhkovskii, L. Dagdug, and S.M. Bezrukov. First passage, looping, and direct transition in expanding and narrowing tubes: Effects of the entropy potential. Journal of Chemical Physics, 2017, 147(13):134104. DOI: 10.1063/1.4993129
D.P. Hoogerheide, S.Y. Noskov, D. Jacobs, L. Bergdoll, V. Silin, D. Worcester, J. Abramson, H. Nanda, T.K. Rostovtseva, and S.M. Bezrukov. Structural features and lipid binding domain of tubulin on biomimetic mitochondrial membranes. Proc. Natl. Acad. Sci. USA , 2017, 114:E3622−E3631. DOI: 10.1073/pnas.1619806114
A.M. Berezhkovskii, L. Dagdug, and S.M. Bezrukov. A new insight into diffusional escape from a biased cylindrical trap. Journal of Chemical Physics, 2017,147(10):104103. DOI: 10.1063/1.5002127
A.M. Berezhkovskii, L. and S.M. Bezrukov. Effect of stochastic gating on channel-facilitated transport of non-interacting and strongly repelling solutes. Journal of Chemical Physics, 2017, 147:084109. DOI: 10.1063/1.4986902
P.A. Gurnev, T.C. Roark, H.I. Petrache, A.J. Sodt, and S.M. Bezrukov. Cation-selective channel is regulated by anions according to their Hofmeister ranking. Angewandte Chemie , 2017, 56:3506−3509. DOI: 10.1002/anie.201611335
P.A. Gurnev, C.B. Stanley, M.A. Aksoyoglu, K. Hong, V.A. Parsegian, and S.M. Bezrukov. Polyethylene glycols in semidilute regime: Radius of gyration in the bulk and partitioning into a nanopore. Macromolecules , 2017, 50:2477−2483. DOI: 10.1021/acs.macromol.6b02571
A.M. Berezhkovskii, L. Dagdug, and S.M. Bezrukov. Bulk-mediated surface transport in the presence of bias. Journal of Chemical Physics , 2017, 147:014103. DOI: 10.1063/1.4991730
A.M. Berezhkovskii, L. Dagdug, and S.M. Bezrukov. Mean direct-transit and looping times as functions of the potential shape. Journal of Physical Chemistry B , 2017, 121:5455−5460. DOI: 10.1021/acs.jpcb.6b08066
D.P. Hoogerheide, P.A. Gurnev, T.K. Rostovtseva, and S.M. Bezrukov. Mechanism of alpha-synuclein translocation through a VDAC nanopore revealed by energy landscape modeling of escape time distributions. Nanoscale , 2017, 9(1):183−192. DOI: 10.1039/c6nr08145b
BOOK CHAPTER:
A.M. Berezhkovskii and S.M. Bezrukov. Intermittent free diffusion in the presence of sparse obstacles: Mean obstacle encounter time. Journal of Physics A: Mathematical and Theoretical , 2016, 49(43):434002. DOI: 10.1088/1751-8113/49/43/434002
M.A. Aksoyoglu, R. Podgornik, S.M. Bezrukov, P.A. Gurnev, M. Muthukumar and V.A. Parsegian. Size-dependent forced PEG partitioning into channels: VDAC, OmpC, and Alpha-Hemolysin. Proc. Natl. Acad. Sci. USA , 2016, 113:9003−08. DOI: 10.1073/pnas.1602716113
S.Y. Noskov, T.K. Rostovtseva, A.C. Chamberlin, O. Teijido, W. Jiang, and S.M. Bezrukov. Current state of theoretical and experimental studies of the voltage-dependent anion channel (VDAC). Biochimica et Biophysica Acta , 2016, 1858:1778−90. DOI: 10.1016/j.bbamem.2016.02.026
R. Ravin, P.S. Blank, B. Busse, N. Ravin, S. Vira, L. Bezrukov, H. Waters, H. Guerrero-Cazares, A. Quinones-Hinojosa, P.R. Lee, R.D. Fields, S.M. Bezrukov, and J. Zimmerberg. Blast shockwaves propagate Ca2+ activity via purinergic astrocyte networks in human central nervous system cells. Scientific Reports , 2016, 6:25713. DOI: 10.1038/srep25713
J.J. Kasianowicz and S.M. Bezrukov. On “Three decades of nanopore sequencing”. Nature Biotechnology , 2016, 34:481−482. DOI: 10.1038/nbt.3570
R. Verdel, L. Dagdug, A.M. Berezhkovskii, and S.M. Bezrukov. Unbiased diffusion in two-dimensional channels with corrugated walls. Journal of Chemical Physics , 2016, 144:084106. DOI: 10.1063/1.4942470
E.M. Nestorovich and S.M. Bezrukov. Inhibiting Bacterial Toxins by Channel Blockage. FEBS Pathogens and Disease , 2016, 74:ftv113. DOI: 10.1093/femspd/ftv113
A.M. Berezhkovskii, L. Dagdug, and S.M. Bezrukov. Range of applicability of modified Fick-Jacobs equation in two dimensions. Journal of Chemical Physics , 2015, 143:164102. DOI: 10.1063/1.4934223
A.J. Kuszak, D. Jacobs, P.A. Gurnev, T. Shiota, J.M. Louis, T. Lithgow, S.M. Bezrukov, T.K. Rostovtseva, and S.K. Buchanan. Evidence of distinct channel conformations and substrate binding affinities for the mitochondrial outer membrane protein translocase pore Tom40. Journal of Biological Chemistry , 2015, 290:26204–26217. DOI: 10.1074/jbc.M115.642173
K.L. Sheldon, P.A. Gurnev, S.M. Bezrukov, and D.L. Sackett. Tubulin tail sequences and posttranslational modifications regulate closure of mitochondrial voltage-dependent anion channel (VDAC). Journal of Biological Chemistry , 2015, 290:26784−9. DOI: 10.1074/jbc.M115.678854
A.M. Berezhkovskii, L. Dagdug, and S.M. Bezrukov. A new approach to the problem of bulk-mediated surface diffusion. Journal of Chemical Physics , 2015, 143(8):084103. DOI: 10.1063/1.4928741
T.K. Rostovtseva, P.A. Gurnev, O. Protchenko, D.P. Hoogerheide, T.L. Yap, C.C. Philpott, J.C. Lee, and S.M. Bezrukov. Alpha-synuclein shows high-affinity interaction with voltage-dependent anion channel suggesting mechanisms of mitochondrial regulation and toxicity in Parkinson disease. Journal of Biological Chemistry , 2015, 290:18467−77. DOI: 10.1074/jbc.M115.641746
S.M. Rappaport, O. Teijido, D.P. Hoogerheide, T.K. Rostovtseva, A.M. Berezhkovskii, and S.M. Bezrukov. Conductance hysteresis in the voltage-dependent anion channel. European Biophysics Journal , 2015, 44(6):465−472. DOI: 10.1007/s00249-015-1049-2
A.M. Berezhkovskii, L. Dagdug, and S.M. Bezrukov. Biased diffusion in three-dimensional comb-like structures. Journal of Chemical Physics , 2015, 142(13):134101. DOI: 10.1063/1.4916310
BOOK CHAPTERS:
L.B. Kish, C.G. Granqvist, S.M. Bezrukov, and T. Horvath. Brain: Biological noise-based logic. Advances in Cognitive Neurodynamics (IV). Springer, 2015, pp. 319−322. DOI: 10.1007/978-94-017-9548-7_45
S.M. Bezrukov and E.M. Nestorovich. Inhibitors of pore-forming toxins The Comprehensive Sourcebook of Bacterial Protein Toxins. 4th edition, J. Alouf, D. Ladant, and M.R. Popoff, eds., Elsevier, 2015, pp. 1095−1134. DOI: 10.1016/B978-0-12-800188-2.00038-0
T.K. Rostovtseva and S.M. Bezrukov. Function and regulation of mitochondrial voltage-dependent anion channel Electrophysiology of Unconventional Channels and Pores. A.H. Delcour, ed., Springer, 2015, pp. 3−31. DOI: 10.1007/978-3-319-20149-8_1
A.M. Berezhkovskii and S.M. Bezrukov. On the applicability of entropy potentials in transport problems. European Physical Journal – Special Topics , 2014, 223(14):3063−3077. DOI: 10.1140/epjst/e2014-02319-3
S.M. Bezrukov, L. Schimansky-Geier, and G. Schmid. Brownian motion in confined geometries. European Physical Journal – Special Topics , 2014, 223(14):3021−3025. DOI: 10.1140/epjst/e2014-02316-6
L.B. Kish, C.G. Granqvist, T. Horvath, A. Klappenecker, H. Wen, S.M. Bezrukov. Bird’s eye view on noise-based logic. International Journal of Modern Physics: Conference Series , 2014, 33:1460363. DOI: 10.1142/S2010194514603639
E.M. Nestorovich and S.M. Bezrukov. Designing Inhibitors of Anthrax Toxin. Expert Opinion On Drug Discovery , 2014, 9:299−318. DOI: 10.1517/17460441.2014.877884
A.M. Berezhkovskii, L. Dagdug, and S.M. Bezrukov. From normal to anomalous diffusion in comb-like structures in three dimensions. Journal of Chemical Physics , 2014, 141:054907. DOI: 10.1063/1.4891566
O. Teijido, S.M. Rappaport, A. Chamberlin, S.Y. Noskov, V.M. Aguilella, T.K. Rostovtseva, S.M. Bezrukov. Acidification asymmetrically affects voltage-dependent anion channel implicating the involvement of salt bridges. Journal of Biological Chemistry , 2014, 289:23670−82. DOI: 10.1074/jbc.M114.576314
P.A. Gurnev, T.L. Yap, C.M. Pfefferkorn, T.K. Rostovtseva, A.M. Berezhkovskii, J.C. Lee, V.A. Parsegian, and S.M. Bezrukov. Alpha-synuclein lipid-dependent membrane binding and translocation through the alpha-hemolysin channel. Biophysical Journal , 2014, 106:556−65. DOI: 10.1016/j.bpj.2013.12.028
A.M. Berezhkovskii, L. Dagdug, V.A. Lizunov, J. Zimmerberg, and S.M. Bezrukov. Trapping by clusters of channels, receptors, and transporters: Quantitative description. Biophysical Journal , 2014, 106:500−9. DOI: 10.1016/j.bpj.2013.12.015
A.M. Berezhkovskii, L. Dagdug, and S.M. Bezrukov. Discriminating between anomalous diffusion and transient behavior in micro-heterogeneous environments. Biophysical Journal , 2014, 106:L09−11. DOI: 10.1016/j.bpj.2013.12.013
S.Y. Noskov, T.K. Rostovtseva, and S.M. Bezrukov. ATP transport through VDAC and VDAC/tubulin complex probed by equilibrium and non-equilibrium MD simulations. Biochemistry , 2013, 52:9246−56. DOI: 10.1021/bi4011495
E.N. Maldonado, K.L. Sheldon, D.N. DeHart, J. Patnaik, Y. Manevich, D.M. Townsend, S.M. Bezrukov, T.K. Rostovtseva, and J.J. Lemasters. VDAC modulates mitochondrial metabolism in cancer cells and is regulated by free tubulin and erastin. Journal of Biological Chemistry , 2013, 288:11920−9. DOI: 10.1074/jbc.M112.433847
P.A. Gurnev, S.-T. Yang, K.C. Melikov, L.V. Chernomordik, and S.M. Bezrukov. Cationic cell-penetrating peptide binds to planar lipid bilayers containing negatively charged lipids but does not induce conductive pores. Biophysical Journal , 2013, 104:1933−9. DOI: 10.1016/j.bpj.2013.02.053
A.M. Berezhkovskii, L. Dagdug, M.-V. Vazquez, V.A. Lizunov, J. Zimmerberg, and S.M. Bezrukov. Trapping of diffusing particles by clusters of absorbing disks on a reflecting wall with disk centers on sites of a square lattice. Journal of Chemical Physics, 2013, 138:064105. DOI: 10.1063/1.4790370
S.M. Rappaport, A.M. Berezhkovskii, J. Zimmerberg, and S.M. Bezrukov. Thermodynamics of inter-leaflet cavitation in lipid bilayer membranes. Physical Review E , 2013, 87:022715. DOI: 10.1103/PhysRevE.87.022715
E.M. Nestorovich and S.M. Bezrukov. Obstructing toxin pathways by targeted pore blockage. Chemical Reviews , 2012, 112:6388−430. DOI: 10.1021/cr300141q
P.A. Gurnev and S.M. Bezrukov. Inversion of membrane surface charge by trivalent cations probed with a cation-selective channel. Langmuir , 2012, 28:15824−30. DOI: 10.1021/la302676t
E.M. Nestorovich, V.A. Karginov, A.M. Berezhkovskii, V.A. Parsegian, and S.M. Bezrukov. Kinetics and thermodynamics of binding reactions as exemplified by anthrax channel blockage with a cationic cyclodextrin derivative. Proc. Natl. Acad. Sci. USA , 2012, 109:18453−8. DOI: 10.1073/pnas.1208771109
L. Dagdug, A.M. Berezhkovskii, and S.M. Bezrukov. Particle lifetime in cylindrical cavity with absorbing spot on the wall: Going beyond the narrow escape problem. Journal of Chemical Physics , 2012, 137(23):234108. DOI: 10.1063/1.4772183
S.M. Bezrukov, X. Liu, V.A. Karginov, A.N. Wein, S.H. Leppla, M.R. Popoff, H. Barth, and E.M. Nestorovich. Interactions of high-affinity cationic blockers with the translocation pores of B. anthracis , C. botulinum , and C. perfringens binary toxins. Biophysical Journal , 2012, 103: 1208−17. DOI: 10.1016/j.bpj.2012.07.050
T.K. Rostovtseva, P.A. Gurnev, M.-Y. Chen, S.M. Bezrukov. Membrane lipid composition regulates tubulin interaction with mitochondrial voltage-dependent anion channel. Journal of Biological Chemistry , 2012, 287:29589−98. DOI: 10.1074/jbc.M112.378778
P.A. Gurnev, R. Ortenberg, T. Dörr, K. Lewis, and S.M. Bezrukov. Persister-promoting bacterial toxin TisB produces anion-selective pores in planar lipid bilayers. FEBS Letters , 2012, 586(16):2529−34. DOI: 10.1016/j.febslet.2012.06.021
L. Dagdug, A.M. Berezhkovskii, Yu.A. Makhnovskii, V.Yu. Zitserman, and S.M. Bezrukov. Force-dependent mobility and entropic rectification in tubes of periodically varying geometry. Journal of Chemical Physics , 2012, 136:214110. DOI: 10.1063/1.4726193
R. Ravin, P.S. Blank, A. Steinkamp, S.M. Rappaport, N. Ravin, L. Bezrukov, H. Guerrero-Cazares, A. Quinones-Hinojosa, S.M. Bezrukov, and J. Zimmerberg. Shear forces during blast, not abrupt changes in pressure alone, generate calcium activity in human brain cells. PLoS ONE , 2012, 7:e39421. DOI: 10.1371/journal.pone.0039421
A.M. Berezhkovskii, L. Dagdug, V.A. Lizunov, J. Zimmerberg, and S.M. Bezrukov. Clusters of absorbing disks on a reflecting wall: Competition for diffusing particles. Journal of Chemical Physics , 2012, 136:211102. DOI: 10.1063/1.4726015
L. Dagdug, M.-V. Vazquez, A.M. Berezhkovskii, V.Yu. Zitserman, and S.M. Bezrukov. Diffusion in the presence of cylindrical obstacles arranged in a square lattice analyzed with generalized Fick-Jacobs equation. Journal of Chemical Physics , 2012, 136:204106. DOI: 10.1063/1.4720385
P.A. Gurnev, M. Queralt-Martin, T.K. Rostovtseva, V.M. Aguilella, and S.M. Bezrukov. Probing tubulin-blocked state of VDAC by varying membrane surface charge. Biophysical Journal , 2012, 102:2070−6. DOI: 10.1016/j.bpj.2012.03.058
M.T. Eddy, T.C. Ong, L. Clark, O. Teijido, P.C.A. van der Wel, R. Garces, G. Wagner, T.K. Rostovtseva, R.G. Griffin. Lipid Dynamics and Protein-Lipid Interactions in 2D Crystals Formed with the beta-Barrel Integral Membrane Protein VDAC1. Journal of the American Chemical Society , 2012, 134:6375−87. DOI: 10.1021/ja300347v
O. Teijido, R. Ujwal, C.O. Hillerdal, L. Kullman, T.K. Rostovtseva, J. Abramson. Affixing N-terminal alpha-Helix to the Wall of the Voltage-dependent Anion Channel Does Not Prevent Its Voltage Gating. Journal of Biological Chemistry , 2012, 287:11437−45. DOI: 10.1074/jbc.M111.314229
M. Weinrich, H. Nanda, D.L. Worcester, C.F. Majkrzak, B.B. Maranville, and S.M. Bezrukov. Halothane changes the domain structure of a binary lipid membrane. Langmuir , 2012, 28:4723−8. DOI: 10.1021/la204317k
T.K. Rostovtseva and S.M. Bezrukov. VDAC inhibition by tubulin and its physiological implications. Biochimica et Biophysica Acta , 2012, 1818:1526−35. DOI: 10.1016/j.bbamem.2011.11.004
S.M. Bezrukov, L.K.J. Vandamme, and L. B. Kish. Special section on 1/f noise: A preface. Fluctuation and Noise Letters , 2011, 10:417−418. DOI: 10.1142/S0219477511000727
A.M. Berezhkovskii and S.M. Bezrukov. Surface area of the domain visited by a spherical Brownian particle. Chaos , 2011, 21:047519. DOI: 10.1063/1.3665090
M.F. Bensaci, P.A. Gurnev, S.M. Bezrukov, and J.Y. Takemoto. Fungicidal activities and mechanisms of action of Pseudomonas syringae pv. syringae lipodepsipeptide syringopeptins 22A and 25A. Frontiers in Microbiology , 2011, 2:216. DOI: 10.3389/fmicb.2011.00216
K.L. Sheldon, E.N. Maldonado, J.J. Lemasters, T.K. Rostovtseva, and S.M. Bezrukov. Phosphorylation oyf voltage-dependent anion channel by serine/threonine kinases governs its interaction with tubulin. PLoS ONE , 2011, 6:e25539. DOI: 10.1371/journal.pone.0025539
P.A. Gurnev, T.K. Rostovtseva, and S.M. Bezrukov. Tubulin-blocked state of VDAC studied by polymer and ATP partitioning. FEBS Letters , 2011, 585:2363−6. DOI: 10.1016/j.febslet.2011.06.008
E.M. Nestorovich, V.A. Karginov, M.R. Popoff, S.M. Bezrukov, and H. Barth. Tailored ß-Cyclodextrin Blocks the Translocation Pores of Binary Exotoxins from C. Botulinum and C. Perfringens and Protects Cells from Intoxication. PLoS ONE , 2011, 6:e23927. DOI: 10.1371/journal.pone.0023927
A.M. Berezhkovskii, V.A. Lizunov, J. Zimmerberg, and S.M. Bezrukov. Functional role for transporter isoforms in optimizing membrane transport. Biophysical Journal , 2011, 101:L14−6. DOI: 10.1016/j.bpj.2011.06.004
K. Yannakopoulou, L. Jicsinszky, C. Aggelidou, N. Mourtzis, T.M. Robinson, A. Yohannes, E.M. Nestorovich, S.M. Bezrukov, and V.A. Karginov. Symmetry requirements for the effective blocking of pore-forming toxins: Comparative study with alpha-, beta-, and gamma-cyclodextrin derivatives. Antimicrobial Agents and Chemotherapy , 2011, 55:3594−7. DOI: 10.1128/AAC.01764-10
L.B. Kish, S.P. Khatri, S.M. Bezrukov, F. Pepper, Z. Gingl, and T. Horvath. Noise-based deterministic logic and computing: A brief survey International Journal of Unconventional Computing , 2011, 7:101−113.
L. Dagdug, A.M. Berezhkovskii, Yu.A. Makhnovskii, V.Yu. Zitserman, and S.M. Bezrukov. Turnover behavior of effective mobility in a tube with periodic entropy potential. Journal of Chemical Physics , 2011, 134:101102. DOI: 10.1063/1.3561680
A.M. Berezhkovskii and S.M. Bezrukov. Effective drift and diffusion of a particle jumping between mobile and immobile states. Journal of Electroanalytical Chemistry , 2011, 660(2):352−5. DOI: 10.1016/j.jelechem.2010.08.017
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